zarrsmith.microscope_manager.readers

Dataset readers by microscope, and detection of the reader of a path (CLI and napari).

Attributes

READERS

Functions

detect_reader(path) → Optional[Tuple[Type[zarrsmith.microscope_manager.microscope_manager.MicroscopeManager], str]]

(reader, microscope name) of the dataset at path, from its layout, or None.

Module Contents

zarrsmith.microscope_manager.readers.READERS: Dict[str, Type[zarrsmith.microscope_manager.microscope_manager.MicroscopeManager]]

zarrsmith.microscope_manager.readers.detect_reader(path: str | pathlib.Path) → Tuple[Type[zarrsmith.microscope_manager.microscope_manager.MicroscopeManager], str] | None

(reader, microscope name) of the dataset at path, from its layout, or None.

Zarr stores of both NGFF versions are read by ZarrManager (zarrv04 names a store without zarr.json).